Data model
General parameters
Record information

Record Information

Description: Information about the record itself
Required: yes
Path: metadata.general_parameters.record_information
Type: polymorphic object (Record_information)
Type_field: access_rights
Contains: see Fields available in record information

Fields available in record information

title

Description: Short descriptive title of the record
Required: yes
Path: metadata.general_parameters.record_information.title
Type: keyword (string)

access_rights

Description: The access rights to the uploaded files. There are three options, 1) "open access" where the files are accessible immediately when the deposition is published, 2) "embargoed access" where the files will only become available after a specified date, 3) "restricted access" where depositors of the record are the only ones who has access
Required: yes
Path: metadata.general_parameters.record_information.access_rights
Type: enumerator (string)
Options: ('open', 'embargoed', 'restricted')

publisher

Description: When made available MBDB is to be considered the publisher, however, the depositors are still the owners (Datacite requirement field to get DOI). This is automatically generated during deposition
Required: yes
Path: metadata.general_parameters.record_information.publisher
Type: enumerator (string)
Options: ('MBDB')

resource_type_general

Description: All records are considered to be datasets (Datacite requirement field to get DOI). This is automatically generated during deposition Required: yes
Path: metadata.general_parameters.record_information.resource_type_general
Type: enumerator (string)
Options: ('Dataset')

resource_type

Description: DataCite item which shows type of dataset the record is, and corresponds directly to which kind of technique was used (MST/BLI/SPR) (Datacite recommended field to get DOI). This is automatically generated during deposition
Required: yes
Path: metadata.general_parameters.record_information.resource_type
Type: enumerator (string)
Options: ('MST', 'BLI', 'SPR')

external_identifier

Description: The (external) identifier of the record which is a DOI generated by Datacite. This will automatically be generated when the record is published
Required: yes
Path: metadata.general_parameters.record_information.external_identifier
Type: enumerator (string)
Options: ('doi:10.XXXX/XXXX-XXXX')

subject_category

Description: DataCite subject category the record data belongs to; the default value is Biophysics (Datacite recommended field to get DOI). This is automatically generated during deposition
Required: yes
Path: metadata.general_parameters.record_information.subject_category
Type: enumerator (string)
Options: ('Biophysics')

deposition_date

Description: The date when the data was deposited; automatically generated
Required: yes
Path: metadata.general_parameters.record_information.deposition_date
Type: string
Format: YYYY-MM-DD

date_available

Description: The date when the data was/will be made publicly available. This will be automatically generated
Required: no
Path: metadata.general_parameters.record_information.deposition_date
Type: string
Format: YYYY-MM-DD

The fields from one of the following objects

Restricted_access

copyright

Description: The people holding copyright
Required: yes
Path: metadata.general_parameters.record_information.copyright
Type: enumerator (string)
Options: ("The depositors retain copyright to the data files and metadata")

Open_access

copyright

Description: The people holding copyright
Required: yes
Path: metadata.general_parameters.record_information.copyright
Type: enumerator (string)
Options: ("Anyone is free to distribute the data and metadata")

license

Description: The license the record is distributed under
Required: yes
Path: metadata.general_parameters.record_information.license
Type: object (license)
contains: see Fields available in license

Fields available in license

name

Description: The name of the license
Required: yes
Path: metadata.general_parameters.record_information.license.name
Type: enumerator (string)
Options: ("CC0 1.0 Universal")

url

Description: The url where further information about the license can be found
Required: yes
Path: metadata.general_parameters.record_information.license.url
Type: enumerator (string)
Options: ("https://creativecommons.org/publicdomain/zero/1.0/ (opens in a new tab)")